Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34849g00001 TTTATCTCGAATGCTAAGAGTGAGGGTGCAACCATTTTGACTGGTGGGTCTCGACCAGAGCATCTTAAAAAAGGATTCTTTGTTGAACCAACCATCATAACTGATGTGACTACTTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCTGTTCTCTGTGTAAAAACCTTTAGCACCGAGGAAGAAGCTATTGATCTAGCAAATGACACTATCTATGGCTTAGGTGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCATTACTAAGGCTTTCAAGGCCGGAATCGTATGGATCAATTGCTCTCAACCATGCTTCACTCAGGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGCCGTGAACTAGGAGAGTGGTCCTGCACAACTAAATTCAATCTAACAGTCAATAAAGCTATAAACAGATAA 432 0.4167 FISNAKSEGATILTGGSRPEHLKKGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERITKAFKAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWSCTTKFNLTVNKAINR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34849g00001 143 PANTHER ALDEHYDE DEHYDROGENASE 1 128 - -
Trme34849g00001 143 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 141 IPR016163 GO:0016620
Trme34849g00001 143 SUPERFAMILY ALDH-like 2 127 IPR016161 GO:0016491
Trme34849g00001 143 Pfam Aldehyde dehydrogenase family 2 130 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34849g00001 Trme-Chr34849 66 964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34849g00001 1 127 Aldehyde Dehydrogenase Gene Family AT1G74920 87.402 1.20e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34849g00001 K00130 - gmx:100170731 263.077