Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34844g00001 ATGAATGTTCCTGGCCTCACTAGAGAAAATGTTGCCAGCCACCTGCAGAAATATCGGTTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAGCACAATAACTTGAACAACTCATTTCTCAGCCCACAAGAGGCATCATTTGGNACGATTTCACCAATGAACGGTCTTGATCTTCAAACTCTTGCAGCTGCTGGCCAGCTCCCAGCACAAAGTTTAGCCACTCTTCAAGCCGCGGGACTTGGCAGGTCAACTGTGAAACCAGGTTTATCAATGCCTCTCATGGATCAAAGAAACCTTTTCAGTTTTGAAAACCCGAGATTGAGATTTGGAGAAGGGCAACAACAACTTTTGAGCAGCAATAAACCAACAAATCTTCTTCATGGAGTTCCTACTAACATGGAGCCAAAGCAACTCGCAAATTTGCACCAATCTGCACAATCCCTCGGCAATTTGAATATGCGAGTCACTGGTTCTTCTACGCAGGGTAATCCCTTATTGATGCAGATGGCACAATCCCAACCTAGAGGTCAGATGCTAAGTGAAATTACCAGTCCTCGTGTTCCGAGACTTCCAAACATCTTGGGGCAGCCTACTTTGTCAAACGGAATTTCTGATGGTCTTTTGGGGAGAAATGGCATAGCTAGTAGCAGCAGAGGGCCTTCATTTAATCCTGTT 672 0.4524 MNVPGLTRENVASHLQKYRLYLRRLSGVSQHNNLNNSFLSPQEASFGTISPMNGLDLQTLAAAGQLPAQSLATLQAAGLGRSTVKPGLSMPLMDQRNLFSFENPRLRFGEGQQQLLSSNKPTNLLHGVPTNMEPKQLANLHQSAQSLGNLNMRVTGSSTQGNPLLMQMAQSQPRGQMLSEITSPRVPRLPNILGQPTLSNGISDGLLGRNGIASSSRGPSFNPV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34844g00001 224 MobiDBLite consensus disorder prediction 195 224 - -
Trme34844g00001 224 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 173 IPR044841 GO:0003700|GO:0006355
Trme34844g00001 224 Gene3D - 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34844g00001 Trme-Chr34844 1 810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34844g00001 1 217 Response Regulator Gene Family AT3G16857 51.528 2.76e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme34844g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34844g00001 - K14491 gmx:100781102 379.407