Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34751g00001 AATATTGTGTTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGAATGGTTTACTTCATGCAAACGGCTTGGACTTGCAGCTGAACATGGGTACTTCCTAAGGTGGAATAGTGACTCTGAATGGGAAACCAGTCATTTCTCTGCGGACCTTGATTGGAAACAGATAGTGGTGCCCGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAACATCGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCCGGATTTTGGTTCCTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGCGTTCTTGCTAATGAACCAGCACTTGTTAAGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAACCAAAGGTTTGGTAGCTGAAAAGGTTCTGTCGAATATGGTTAATGGCGGTAATCCACCAGATTTCGTGATGTGCATCGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCATCGTTACCAGCAGCTCCGGATATTTTTGCCTGCACTGTAGGAAGGAAGCCTAGCAAGGCCAAGTATTTCCTTGATGATCCTTCTGATGTTGTAAGGATGCTTCAAGGTCTTGCTGCCTCATCAATTCCAACAAAGCCCAGGCATCTTGCCCAATTCCAGTGCAACTTTGCTGTTGTGGAACCTGATTCTTTTCTTGCTCCTGAACCGGTTTGCATGGCATCTGGAAAGTTGCGGTGTGGTTCACGGACGGTCTGA 777 0.4569 NIVFIVSGRARDSLSEWFTSCKRLGLAAEHGYFLRWNSDSEWETSHFSADLDWKQIVVPVMQSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLSNMVNGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPAAPDIFACTVGRKPSKAKYFLDDPSDVVRMLQGLAASSIPTKPRHLAQFQCNFAVVEPDSFLAPEPVCMASGKLRCGSRTV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34751g00001 258 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 93 224 - -
Trme34751g00001 258 NCBIfam trehalose-phosphatase 5 211 IPR003337 GO:0003824|GO:0005992
Trme34751g00001 258 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 212 IPR001830 GO:0003824|GO:0005992
Trme34751g00001 258 NCBIfam HAD-IIB family hydrolase 2 166 IPR006379 -
Trme34751g00001 258 SUPERFAMILY HAD-like 2 212 IPR036412 -
Trme34751g00001 258 Gene3D - 1 78 IPR023214 -
Trme34751g00001 258 Gene3D - 93 222 IPR023214 -
Trme34751g00001 258 FunFam Trehalose-6-phosphate synthase 2 47 126 - -
Trme34751g00001 258 CDD HAD_TPP 1 206 - -
Trme34751g00001 258 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 1 80 - -
Trme34751g00001 258 Pfam Trehalose-phosphatase 1 202 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34751g00001 Trme-Chr34751 1 1082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34751g00001 1 225 Trehalose Biosynthesis Gene Families AT1G23870 72.444 2.24e-115 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34751g00001 K16055 - gmx:100775779 411.764