Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34713g00001 GCTCACACAATTGGTATCTCCCTTTGCACGTCATTTTCAAACCGTTTGTACAATTTTACCGGAAAGGGTGATCAAGATCCATCACTTGACAGTGAATATGCGAAAAATCTCAAGACATTCAAGTGCAAGAACATCAATGACAATACTACAATAGTCGAAATGGACCCCGGAAGTCGTAAAACATTTGATCTTAGTTACTATAATCAGGTTTCAAAGAGAAGAGGTTTGTTTGAATCWGATGCTGCATTGTTGAATAATGCAGTTACAAAATCTCTTGTGACTCAATTACTTCAAGGKTCACTTGAAAATTTCTATGCTGAATTTGCAAAATCAATTGAGAAAATGGGTAAAATTAAAGTGAAGACAGGGTCAGAAGGTGAGATCAGGAAACAATGTGCATTTGTAAATAGTTAA 414 0.3551 AHTIGISLCTSFSNRLYNFTGKGDQDPSLDSEYAKNLKTFKCKNINDNTTIVEMDPGSRKTFDLSYYNQVSKRRGLFESDAALLNNAVTKSLVTQLLQGSLENFYAEFAKSIEKMGKIKVKTGSEGEIRKQCAFVNS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34713g00001 137 PRINTS Plant peroxidase signature 53 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 PRINTS Plant peroxidase signature 69 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 Gene3D Peroxidase, domain 2 1 115 - -
Trme34713g00001 137 PANTHER PEROXIDASE 25-RELATED 1 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 Pfam Peroxidase 1 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 ProSiteProfiles Plant heme peroxidase family profile. 1 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 SUPERFAMILY Heme-dependent peroxidases 1 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme34713g00001 137 Gene3D - 116 136 - -
Trme34713g00001 137 FunFam Peroxidase 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34713g00001 Trme-Chr34713 197 610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34713g00001 1 137 Peroxidase AT1G05260 67.153 3.25e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34713g00001 K00430 - gmx:100803114 220.705