Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34706g00001 ATGGATCGGGAAGACGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGGAATTGGAATAAGTGTCCTTGTACAACAAAGCCTTGTAACGGTTGATAGGAAAAACAAGATCGGAATGCATGATTTGCTACGAGACATGGGAAGAGAGATTGTCCGCAAGAAATCTAAAGAGGGGGGCAAGGAGCCAAGTAGATTATGGCGTTACGAGGATGTGCTTGAGTTGTCAAAAGATACT 237 0.4262 MDREDVTEILKDCGHFPGIGISVLVQQSLVTVDRKNKIGMHDLLRDMGREIVRKKSKEGGKEPSRLWRYEDVLELSKDT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34706g00001 79 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 73 IPR044974 GO:0006952
Trme34706g00001 79 SUPERFAMILY "Winged helix" DNA-binding domain 5 75 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34706g00001 Trme-Chr34706 816 1052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34706g00001 6 67 WRKY Transcription Factor Family AT5G45050 45.161 1.03e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34706g00001 - - tpra:123891787 132.88