Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34680g00001 ATGTTAGTAGTTAGCGTGCTAGTGCGCGGGGGGGTGGCTCTTACCCTAGGTTTCTTTGTGACAATCAGTTTATCAGCTGTGATGTTCAAGTCGAATGAACTTGTTAAGAAACAGACTGCTCTAAAGGGAGATCAGAAAATCTCTATTCTTCTTGGTGTCTCTTTTTCCTTCATGCTGTATGTGATATGCATTTACTGGTGGTATCAAAATGATGATATTCTATACCCTCTGGCCATGTTTCCGCCAGAATCAACACCACCTTTCTGGCATGCAATATTCATCATTTTGGTTAATGTTTATTTGCTTTATCAAACTTAG 318 0.3962 MLVVSVLVRGGVALTLGFFVTISLSAVMFKSNELVKKQTALKGDQKISILLGVSFSFMLYVICIYWWYQNDDILYPLAMFPPESTPPFWHAIFIILVNVYLLYQT 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34680g00001 105 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 16 98 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34680g00001 Trme-Chr34680 270 871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34680g00001 1 104 C3H Transcription Factor Family AT5G01960 54.808 8.53e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34680g00001 - K22379 aprc:113864793 153.295