Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34618g00001 CCTTTGTTGGGGTATTGTGTTGTGGAAGAGGAGAAGCTTTTGGTTTATAAGCATATGTCGAATGGGACGCTTTTTTCGCTGTTGCATAAGAATAGTGGTGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCTAGGGGACTTGCGTGGTTGCATCATGGTTGTCATCCTCCGATTATACAACAGAATATTTGTTCTAATGTGATTCTTGTGGATGAAGAATTTGATGCTCGGATAATGGACTTTGGACTCGCCAGGCTTATGACGTCTGATGCCAATGGTAGTTTTGTGAACGGCGATTTGGGGGAACTTGGTTATATAGCTCCTGAGTATTCAAGTACGATGGTTGCTTCGTTGAAAGGGGATGTGTATGGATTCGGTGTTTTGCTTTTGGAGTTGGTCACCGGGTACAAACCTCTCGAGGTGAACCACGGCGATGAAGAGTTTAAGGGTAACTTGGTGGATTGGGTTAATGTGCATTCTAGTTCAGGTAGACTCAAGGATTGCATCGATAAGGCGATCAGTGGAAAAGGTAACGATGAGGAGATTCTGCAGTTTCTGAAAATCGCATCGAATTGTGTGATTACTCGCCCGAAAGATAGGTGGTCTATGTACCAAGTTTATCATTCGTTGAAGGGAATATCCAAAGATCACAGTTTCTCTGAACAAGATGACGTATTTCCCTTGATCTTCGGTAAGCCAGAAAATGAGCCAGCGTAG 729 0.4417 PLLGYCVVEEEKLLVYKHMSNGTLFSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARIMDFGLARLMTSDANGSFVNGDLGELGYIAPEYSSTMVASLKGDVYGFGVLLLELVTGYKPLEVNHGDEEFKGNLVDWVNVHSSSGRLKDCIDKAISGKGNDEEILQFLKIASNCVITRPKDRWSMYQVYHSLKGISKDHSFSEQDDVFPLIFGKPENEPA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34618g00001 242 SUPERFAMILY Protein kinase-like (PK-like) 2 214 IPR011009 -
Trme34618g00001 242 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34618g00001 242 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 217 - -
Trme34618g00001 242 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 19 236 - -
Trme34618g00001 242 Pfam Protein tyrosine and serine/threonine kinase 2 212 IPR001245 GO:0004672|GO:0006468
Trme34618g00001 242 Gene3D Transferase(Phosphotransferase) domain 1 19 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34618g00001 Trme-Chr34618 1 729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34618g00001 1 240 Receptor kinase-like Gene Family AT3G28450 68.443 5.58e-112 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trme34618g00001 PK_Tyr_Ser-Thr 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34618g00001 - - gmx:100810378 437.573