Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34609g00001 ATGATTGAAAGAAGGATTAAAGCTTCAAAGGTTGCTCTTAAAATATTATTTCCTAGTGAGCGTCGCCTGTATGATAAGGTCTTTTCGGGATNCTTCTTTATATCATCTGATCTTTGGTTTTCTGAGGTTTGTCGTGGAGCAACGATACAACTGTTGAACTTTGCAGATTCGTTTGTGAATGGAAGTCCTTCAGCATGGCGTTTGTTTAAAATCCTTGACTTGTTTGAGACACTGTGTGATCTCATTCCCGAATTTGAAGCATTGTTTACCGATTCCTTGGTGAATGAAGCAATAAAAACAAAGAATAAATTGGGTGAAGTAAGTAGAAACATTTTCATGGAATTTGGGAATCTGATCTTTCTTACGCCGGATGCAGAGTTAGATTGTTGGTTTGACGGTGGGGTTCATCCAATGACCTGCGAGGCTACAGGCTACATCTTGTTGGCTTTCTGGTCAAGACAAAAACTGGAGCAAGTTTTACGAGAATACTCCATGGTTGTTGCTAATGGAGCGGGAACATCTTTATTCGATTCGCAGATGGAGCTGATAATGGAGAAGTTTGAGAGAAATTTGGAAGCTAAGTCACAAACTTATAAGGACCCCGCTTTGCG 611 0.401 MIERRIKASKVALKILFPSERRLYDKVFSGXFFISSDLWFSEVCRGATIQLLNFADSFVNGSPSAWRLFKILDLFETLCDLIPEFEALFTDSLVNEAIKTKNKLGEVSRNIFMEFGNLIFLTPDAELDCWFDGGVHPMTCEATGYILLAFWSRQKLEQVLREYSMVVANGAGTSLFDSQMELIMEKFERNLEAKSQTYKDPALR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34609g00001 204 SUPERFAMILY Cullin repeat-like 3 204 IPR016159 -
Trme34609g00001 204 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 204 IPR004140 GO:0000145|GO:0006887
Trme34609g00001 204 Pfam Exo70 exocyst complex subunit 4 204 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme34609g00001 204 Gene3D Exocyst complex component Exo70 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34609g00001 Trme-Chr34609 183 793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34609g00001 2 203 EXO70 exocyst subunit family AT5G58430 52.913 1.09e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34609g00001 K07195 - mtr:11409595 295.049