Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34586g00001 ATGAATGTGCATAAAATCTCAAATTCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGAAGAGGCAGTGAATCTTGTAGAGTCTTATATCTTAAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATAGAGCAGCTTGTAGCGAGAGCAGCTGATTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCAGCCGGGAGGAGAAGAAAGTATCATGATGATGTTACTGTAATGGTGATCATGCTTGGAATGAATCAGAGAACTTCAAAAGCTTCAACTTGTATCTAA 312 0.3878 MNVHKISNSDQFVIVGSDGLFDFFSNEEAVNLVESYILSNPFGDPAKFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTVMVIMLGMNQRTSKASTCI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34586g00001 103 ProSiteProfiles PPM-type phosphatase domain profile. 1 90 IPR001932 -
Trme34586g00001 103 SUPERFAMILY PP2C-like 3 91 IPR036457 -
Trme34586g00001 103 Gene3D - 1 100 IPR036457 -
Trme34586g00001 103 Pfam Protein phosphatase 2C 2 56 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34586g00001 Trme-Chr34586 543 945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34586g00001 1 101 PP2C-type Phosphatase Gene Family AT3G16560 75.248 1.10e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34586g00001 - - vvo:131631550 199.519