Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34577g00001 ATGATAACAACCTCGTTTTTTCCTTCATCATTCTCCTTATTCATCCTCTTCATACTCACCTTCATTCTCTCCGCCGCCACCTTGTTCCTCCGTCACAAAAATGANNNNNNNACTCCACCAGGTCCACCGGGATTCCCAGTCATCGGTAGCCTCCACATGTTGGGTACCCTCCCACACAGAACCCTCCAAGCCTTATCCAAAAAACACGGCCCAATCATGTCAATACGGTTAGGACAAGTCCCAACAATCATTGTCTCTTCATCTTCAGCTGCAGAACAATTCCTCAAAACAAACGACATCGTTTTCTCAAGCCGTCCAAAACTTGAAGCTACTCATTACCTCTCTTATGGTTCTAAAGGTTTGGTTTTCTCTGAATACGGTCCTTATTGGCGTAACGTGAGAAAAATTTGTACTCTGCAGCTTTTAAGTGCTTCTAAAGTTGAGTCGTTTGCGCCTTTGAGGAAAAGGGAAATGGAATTGGCTATGAAGTTGGTGAAGAAAGCTGCGAGTTTGAGTGAGGTTGTTGATGTTAGTGAGTTTGTTCATAATGTTATTGTGGATATTGTGTATAAAATGGTGTTGGGGTGTAGTGTTGATGAGGAGTTTGATTTGAAGGGACAAATTCAACAGGGGATGGAACTTTCTGGTGCTTTTAATCTTTCTGATTATGTTCCTTTTCTTGGAGTTTTTGATCTTCAGGTATGTACTATGTAG 714 0.4146 MITTSFFPSSFSLFILFILTFILSAATLFLRHKNXXXTPPGPPGFPVIGSLHMLGTLPHRTLQALSKKHGPIMSIRLGQVPTIIVSSSSAAEQFLKTNDIVFSSRPKLEATHYLSYGSKGLVFSEYGPYWRNVRKICTLQLLSASKVESFAPLRKREMELAMKLVKKAASLSEVVDVSEFVHNVIVDIVYKMVLGCSVDEEFDLKGQIQQGMELSGAFNLSDYVPFLGVFDLQVCTM 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34577g00001 237 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme34577g00001 237 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme34577g00001 237 Gene3D Cytochrome P450 27 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme34577g00001 237 Pfam Cytochrome P450 39 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme34577g00001 237 PANTHER CYTOCHROME P450 93A3-LIKE 15 236 - -
Trme34577g00001 237 SUPERFAMILY Cytochrome P450 35 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34577g00001 Trme-Chr34577 294 1007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34577g00001 12 231 Cytochrome P450 AT3G48320 37.668 1.78e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34577g00001 - - vvo:131631047 341.273