Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34506g00001 GGTGAACAAGGGGCAGCCATACATATCGTTTTGGTTGATGCAAACTCAGGCCAAGTTGTCACATCAGGCCCAGAGTCATGTGCCAAACTAGATGTCTTTGTTCTTGAGGGGGATTTCAATAATGAGGATGATGAAAATTGGGGCGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGTCTGGCGATCTGCAAGTCATACTAAAGGAGGGTGTAGGGACACTGGGTGAGATCTCATTTACTGACAACTCCAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCTCAGGTTTTGGAGAAGGAATGCGTATTCGTGAAGCCAAATCAGAAGCTTTCACAGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGCATGATGAGGTTTGGAGACTGGAGAAGATTGGTAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGAATATATAATGTTGAAGACTTTCTAAGACTTGTGATCAGAGACTCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATATCCTTGTTGAGCACGCAAAGACTTGTGTACTCAGTGGAAAACTCTATGTATATTATCCCGAGGATGCAAGAAACGTTGGTGTTGTTTTCAATCACATTTATGAATTGAGCGGTTTAATTGCCAATGACCAGTATTACTCAGCTGATTCTCTCTCTGAGAGCCAAAAG 759 0.4295 GEQGAAIHIVLVDANSGQVVTSGPESCAKLDVFVLEGDFNNEDDENWGEEEFESHIVKEREGKRPLLSGDLQVILKEGVGTLGEISFTDNSSWIRSRKFRLGLKVASGFGEGMRIREAKSEAFTVKDHRGELYKKHYPPALHDEVWRLEKIGKDGSFHKRLNKAGIYNVEDFLRLVIRDSQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNHIYELSGLIANDQYYSADSLSESQK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34506g00001 253 Pfam Calmodulin binding protein central domain 140 206 IPR046830 -
Trme34506g00001 253 Pfam Calmodulin binding protein-like N-terminal domain 2 128 IPR046831 -
Trme34506g00001 253 PANTHER OS02G0177800 PROTEIN 1 252 IPR012416 GO:0005516
Trme34506g00001 253 Pfam Calmodulin binding protein C-terminal domain 211 253 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34506g00001 Trme-Chr34506 172 1112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34506g00001 1 253 Calmodulin-binding Proteins AT4G25800 79.842 1.42e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34506g00001 - - gmx:100812605 449.129