Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34466g00001 GAGGAGGAGATGGAAGAGATGGAGGATATTGAGCCGCCGCCAGCTTCTGTTCCTTTTTCTCAACTCTTTGCTTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGCTCTGTCGCCGCTGCTGCTCACGGCACTGCTCTTGTTGTTTACTTGCACTACTTTGCTAAAGTTATTCAGGTTCCTCAATATCCACAGCAGGATCAGTTTCATAGGTTCAAGGAGTTAAGTGTTAAGAAAATGGAGAATCAGAGGGTGAGGATTCAGAGAAGTATTAGAGCCCTATTTAAACAAGAATTTGCCCCTATTGTCGAACCTGGCTTTTGTGAGTGGGTGATTAGAACTTGGTTTGTCCACCACCCGATGATGACTGATGAGATTGATGCCGGAACTRGTCCATTATTTGGTTGGACGTGA 417 0.4556 EEEMEEMEDIEPPPASVPFSQLFACADRFDWFLMVVGSVAAAAHGTALVVYLHYFAKVIQVPQYPQQDQFHRFKELSVKKMENQRVRIQRSIRALFKQEFAPIVEPGFCEWVIRTWFVHHPMMTDEIDAGTXPLFGWT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34466g00001 138 Coils Coil 78 98 - -
Trme34466g00001 138 Gene3D ABC transporter type 1, transmembrane domain 11 95 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34466g00001 Trme-Chr34466 1 829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34466g00001 11 59 Calmodulin-binding Proteins AT2G36910 42.308 1.98e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34466g00001 K05658 - gmx:100799399 122.864