Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34461g00001 ATGTCAAGACTAAGCTTTAGATTGTTGTATACCCCTATATCAGATCCAGAATCCAAGGGATATTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAACCAGGTGACGTGGTTGAAGTGAAAGGGCCCATTGAAAAGTTCAGATATACTCCTAATATGAAGAAGAGCATTGGCATGATTGCCGGTGGCTCAGGAATTACTCCTATGCTTCAGGTAATTGAGGCTATATTGAAGAATTCTGATGACAAAACTCAG 282 0.3901 MSRLSFRLLYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKFRYTPNMKKSIGMIAGGSGITPMLQVIEAILKNSDDKTQ 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34461g00001 94 Pfam Oxidoreductase NAD-binding domain 68 94 IPR001433 GO:0016491
Trme34461g00001 94 SUPERFAMILY Riboflavin synthase domain-like 9 61 IPR017938 -
Trme34461g00001 94 Pfam Oxidoreductase FAD-binding domain 10 58 IPR008333 -
Trme34461g00001 94 Gene3D - 49 94 IPR039261 -
Trme34461g00001 94 Gene3D Translation factors 6 48 - -
Trme34461g00001 94 CDD cyt_b5_reduct_like 10 94 - -
Trme34461g00001 94 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 47 92 IPR039261 -
Trme34461g00001 94 PRINTS Cytochrome B5 reductase signature 8 15 - -
Trme34461g00001 94 PRINTS Cytochrome B5 reductase signature 67 86 - -
Trme34461g00001 94 PRINTS Cytochrome B5 reductase signature 44 58 - -
Trme34461g00001 94 PANTHER NADH-CYTOCHROME B5 REDUCTASE 10 94 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34461g00001 Trme-Chr34461 62 961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34461g00001 10 94 NADPH P450 reductases AT5G17770 51.765 1.31e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34461g00001 K00326 - gmx:100781191 165.622