Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3445g00001 ATGCTTAATGTTGACGTGGCAATAAATAATACAAATGATCAGTACCAGACACTCACAGATCCAAATAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCATACCTGCTTCCAAGGAGGAAGGAATTTTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGATCCCTTGCGGAGCTGAAAGGTTTTGAGATTAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGAGCTTTTTGAGAACTTTCTCCATGGCTCAACCTTAAAGGAATGCTATTCAGAAGTTGCTTTTGTGGCAAACCGCTGGCTCGATCTTCTTGATAACCAAGGAAAGGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTCAGCAGAAGTCTTGTGCTGTTACCACCGCTAAACGTCTTGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTCAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATTCGCTCTATAATTGACTGGTCCTATTACAAGCAGCGGCTTGGTTCGGCAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCTAGGGTTGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAAAGAAAAATAGATGATACCTTTAAGTCAATGAACAAGAATGAGAGCTCAAAAAAGCATAATGATTCTAATGGCATGGAGGATGAGATTGTTAATGACATGGAGGACTTTGGAAACAGGGGCAGGAGTTCTACATCTGGACCTAGACCAATTATACGGCATTACAAAGCTAACCATGAACAACATTCAGAGAAGTTCAATGGTCAAGAAGATTCAGAGCAGCATATTGGCAGTAGCAACATAGATCAGTCACTTTCACTGTCACAACAAGATGAAATATGCGAAAATGTTGATAGAATTGTAGATTATCAAGGATGGCTTCAAATAAAAAAGAGAAAGTGGAAAAGTATGCTGGGAAAGAGAAAGAAGCAAAG 1220 0.3984 MLNVDVAINNTNDQYQTLTDPNRKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKVFQAELFENFLHGSTLKECYSEVAFVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFQTDAEVMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSMNKNESSKKHNDSNGMEDEIVNDMEDFGNRGRSSTSGPRPIIRHYKANHEQHSEKFNGQEDSEQHIGSSNIDQSLSLSQQDEICENVDRIVDYQGWLQIKKRKWKSMLGKRKKQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3445g00001 406 SUPERFAMILY DNA/RNA polymerases 6 271 IPR043502 -
Trme3445g00001 406 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 405 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Trme3445g00001 406 FunFam DNA polymerase epsilon catalytic subunit 75 259 - -
Trme3445g00001 406 MobiDBLite consensus disorder prediction 281 309 - -
Trme3445g00001 406 Gene3D - 55 182 IPR042087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3445g00001 1 406 Core DNA Replication Machinery Family AT1G08260 74.138 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3445g00001 K02324 - gmx:100812003 677.167