Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34448g00001 ATGACTGGTGTAACAGGTCCATTCAGGTATACATCTGATGGAAACCTTGCTAATCCAGCATATGAGATCATCAATGTGATCGGAACAGGGACTCGCAGGATCGGTTATTGGTCTAATTACTCTGGATTATCAATTGTTCCTCCAGAAACACTTTATTCAAAACCACCTAATCGTTCCATTGAAAACCAAAAGCTACTCACTGTGTTTTGGCCGGGTGAAACAACCCAGAGACCTCGCGGTTGGGTTTTTCCAAACAATGGAAAGATGTTAAAAATCGGAGTACCGAAAAGGGTTAGTTACCGCGAATTTGTTTCTCAGGTACAATCCAGTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTGCCCTATGCTGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCAAAGCAATCCTAGTAACACCGAGCTTTTGCGCCTGATCACTGCCGGGGTCTTTGATGCTGCAGTAGGTGACATTACAATTACTACAGAAAGAACAAGGATGGTGGATTTTACTCAGCCATATATAGAGTCTGGTCTAGTGGTCGTAGCATCGGTTAAGAAGACGGATTCCAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTAACAGCTATCTTCTTCCTACTAGTGGGAGCTGTTGTTTGGATTCTAGAGCATAGACTGAATGATGATTTTAGAGGAACTCCTAAAAAACAAGTAGCCACAATTTTGTG 752 0.4215 MTGVTGPFRYTSDGNLANPAYEIINVIGTGTRRIGYWSNYSGLSIVPPETLYSKPPNRSIENQKLLTVFWPGETTQRPRGWVFPNNGKMLKIGVPKRVSYREFVSQVQSSDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGQSNPSNTELLRLITAGVFDAAVGDITITTERTRMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGTPKKQVATIL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34448g00001 250 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 250 IPR015683 -
Trme34448g00001 250 SMART GluR_14 91 244 IPR001320 GO:0015276|GO:0016020
Trme34448g00001 250 Pfam Ligated ion channel L-glutamate- and glycine-binding site 106 193 IPR019594 GO:0004970|GO:0016020
Trme34448g00001 250 SUPERFAMILY Periplasmic binding protein-like I 2 82 IPR028082 -
Trme34448g00001 250 Gene3D - 201 248 - -
Trme34448g00001 250 Gene3D - 91 200 - -
Trme34448g00001 250 SUPERFAMILY Periplasmic binding protein-like II 65 217 - -
Trme34448g00001 250 Gene3D - 1 90 - -
Trme34448g00001 250 FunFam Glutamate receptor 85 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34448g00001 Trme-Chr34448 200 1034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34448g00001 1 250 Ion Channels AT4G35290 61.200 5.13e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34448g00001 K05387 - gmx:100788917 467.233