Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34436g00001 ATGGTTGTTTTCGACCTCCTCATGTGTTTTCCGTTCGAAGTTGTTGCAAAGAGATTTTCGNCTCCTACCCTAACTCATACTCATAATATACTCAATTCACTTCGCCTACTTCGCCTTTTTCGTTTCTACAGAGTTGCTAGTTTCTATCTTAAGCTTGAGAAGAGTGATAAGATAAATTTCACTTATATGCGCACCGCAATGATAATCACGGTGGCATGTTTTGTCTCCCATTCTGGGGCATGTGTGTTCTATAATTTGGCAACCTTGAATAGCGACCCCAAAGAAACATGGATTGGATCGCAAAAACCGACGTTTCTACAAGAGAAGTGGTGGAACACATATGGTATTTCCATGTATTGGGCCGCCGTAACTTTTTCAACGGTTGGATATGGTGATTGGCACGCGGTGAGTTCTTTAGAGATGGCTTGCACGGTCATTTTTCTGTACATCAATCTTGCAGCGGTAGCATATATCACGGGGTATATAACTAATTGGATGTCTCCTGCCATGGGTAAAGTAGAAGAATATAAAGAACGCCGATGTGTTGCTGCAAGTTTTTGCGATCGGCATTGCATACCTACTCCCATGCGAGATGAGATATTTTCTCATTTAAGTTTGGAGTATACAACCGACTTGCATGGATTTCAATATTACAAAGATCATCAGCTTCTCCAATCACTGCCTAGAGCTATAAAAACAAGC 702 0.4131 MVVFDLLMCFPFEVVAKRFSXPTLTHTHNILNSLRLLRLFRFYRVASFYLKLEKSDKINFTYMRTAMIITVACFVSHSGACVFYNLATLNSDPKETWIGSQKPTFLQEKWWNTYGISMYWAAVTFSTVGYGDWHAVSSLEMACTVIFLYINLAAVAYITGYITNWMSPAMGKVEEYKERRCVAASFCDRHCIPTPMRDEIFSHLSLEYTTDLHGFQYYKDHQLLQSLPRAIKTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34436g00001 234 PANTHER POTASSIUM CHANNEL AKT1 3 234 IPR045319 GO:0005249|GO:0006813
Trme34436g00001 234 Pfam Ion channel 86 166 IPR013099 -
Trme34436g00001 234 SUPERFAMILY Voltage-gated potassium channels 3 167 - -
Trme34436g00001 234 Gene3D - 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34436g00001 Trme-Chr34436 1 976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34436g00001 3 234 Ion Channels AT2G26650 34.483 1.19e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34436g00001 K21867 - csin:114314576 162.925