Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34414g00001 TGGTCTCTTGGCGCTATAATGTATGAGATGCTTGTCGGTTATCCTCCATTTTATTCTGATGATCCTGTAACAACATGCAGAAAGATTGTGCACTGGAAAAATCACTTAAAATTTCCGGACGAGGCAAGATTAACACCTGAAGCAAAAGATCTGATATGCAGGTTGCTTAGTGGTGTTCCGCATAGACTTGGTACAAGAGGAGCGAATGAAATTAAAACTCATCCGTGGTTTAGAGATGTCATATGGGACAGACTCTATGAAACCGAGGCAGCATTTAAACCACGAGTCATTGGAGAACTTGACACTCAAAATTTTATGAAATTCGATGAGGTTGAACCACCAAAGCCATATCGAACTGGATCTGGACCGATCAGAAAG 378 0.4127 WSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICRLLSGVPHRLGTRGANEIKTHPWFRDVIWDRLYETEAAFKPRVIGELDTQNFMKFDEVEPPKPYRTGSGPIRK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34414g00001 126 Pfam Protein kinase domain 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34414g00001 126 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Trme34414g00001 126 ProSiteProfiles AGC-kinase C-terminal domain profile. 78 126 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme34414g00001 126 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Trme34414g00001 126 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34414g00001 126 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34414g00001 Trme-Chr34414 404 1073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34414g00001 1 126 AGC Kinase Gene Family AT4G33080 73.228 4.98e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme34414g00001 Pkinase 1.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34414g00001 K08790 - gmx:100802177 243.432