Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34400g00001 GGAGATACTCTCGATTACCTTGGCATCCCAGGTCTTCACTTGGCTGGAAGCCAGGGGGTGGTTGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCAGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGAATATATCTGCCCGGTGATATAAACTACCCTGGAGGAGCATTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCATTTGAAGAGCTAAAGGTGAAAGAAATAAAAAATGGACGCTTGGCAATGATGGCTTGGTTAGGCTTCTTCATGCAAGCGGCACTGACGGGTAAAGGTCCTGTACAGAACATTATGGATCACATCTCCGATCCTTTCCACAACAACTTGCTGGGGTTACTCAATTCAATGAAATTACACTAG 405 0.4519 GDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGFFMQAALTGKGPVQNIMDHISDPFHNNLLGLLNSMKLH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34400g00001 134 Gene3D Chlorophyll a/b binding protein domain 1 127 - -
Trme34400g00001 134 SUPERFAMILY Chlorophyll a-b binding protein 2 130 - -
Trme34400g00001 134 Pfam Chlorophyll A-B binding protein 21 101 IPR022796 -
Trme34400g00001 134 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 126 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34400g00001 Trme-Chr34400 57 917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34400g00001 1 130 Chloroplast and Mitochondria Gene Families AT1G76570 83.077 1.03e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34400g00001 K14172 - gmx:100786260 253.832