Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34383g00001 AGTTTTGGCTACAAATGCAATAGTGATAGAGGTATCCCTAGCGAGATCGCCAATGGCTACAAAAATCTTCCTATAGTCCGTAGAGCAAGTAGTTTCTCTTGTTTGTCAGGTGCAGCCATAAGTGCAAATGCTACACTAGCCAACACAAACATATGCAATGGTAAGATAGGTGTTGAAATCCTTCCAAGTTGGGATTCTCCTAATTCGTTTCGTAGAGTACCTTCTTCGCCAAGTCTTTCACGGTTCGAAAGACTATCGTCTTCGCTCCCAAATAGTCTCTCTTATCTAAGTTCCAGTCCTTCCACTACCAGTGATAGCCTTGAATACGACTCCTGCCAGTTGAAATGCATGAGTGATCGTCCTAGTACCGACGGTTTTCTTATTGCTAAAGAAGTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGTTATTTTGTGCAATTTATGATGGATTTAATGGAAGAGATGCAGCTGATTTTCTGGCCGGTACCCTCTACGAAACCATCATATCTTACCTAGATAAGTTAATCTGGGAATTGGAGCCGGGTTCCATCACAACTTCCGACCATGCAGATTTGGGTGAACTCCTTCGATATAAGTTGGATGATAGTCTTCATTGTCACGAGGATCACTCTCTGTCAAGATCATCACGGGAGTCTTTTTCACGCGGGGTACTTGATAGCCTCGACCGTGCTCTTAGTCAGGCTGAGAATGACTTCTTGTACATGGTTGAGCAGGAAATGGGAGAACGTCCGGATTTAGTTTCTATCGGATCTTGTGTTTTGCTTTTGCTTCTTCATGGTAATGATTTGTATACACTGAATCTTGGCGACAGTAGAGCAGTACTAGCGACGTGCAGTAGCGATGACAGAATGAATAAGAGTGAGAGACTCAAGGCTATACAGCTTACAGATAGTCACACTGTTGATAATGAAGCTGAAAGGACTAGACTCGTGGCTGATCATCCCGATGATCCTAAGGTCGTCATAGCAGGAAAAGTGAAAGGTAAGTTGAAGGTTACTCGTGCATTCGGAGTTGGCTACTTGAAAAAG 1086 0.4337 SFGYKCNSDRGIPSEIANGYKNLPIVRRASSFSCLSGAAISANATLANTNICNGKIGVEILPSWDSPNSFRRVPSSPSLSRFERLSSSLPNSLSYLSSSPSTTSDSLEYDSCQLKCMSDRPSTDGFLIAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIISYLDKLIWELEPGSITTSDHADLGELLRYKLDDSLHCHEDHSLSRSSRESFSRGVLDSLDRALSQAENDFLYMVEQEMGERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSSDDRMNKSERLKAIQLTDSHTVDNEAERTRLVADHPDDPKVVIAGKVKGKLKVTRAFGVGYLKK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34383g00001 362 Gene3D - 85 362 IPR036457 -
Trme34383g00001 362 CDD PP2Cc 139 362 IPR001932 -
Trme34383g00001 362 SMART PP2C_4 117 362 IPR001932 -
Trme34383g00001 362 SUPERFAMILY PP2C-like 140 361 IPR036457 -
Trme34383g00001 362 PANTHER PROTEIN PHOSPHATASE 2C 115 361 IPR015655 GO:0004722|GO:0006470
Trme34383g00001 362 ProSiteProfiles PPM-type phosphatase domain profile. 127 362 IPR001932 -
Trme34383g00001 362 Pfam Protein phosphatase 2C 227 362 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34383g00001 Trme-Chr34383 1 1086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34383g00001 1 362 PP2C-type Phosphatase Gene Family AT3G16560 61.957 1.31e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34383g00001 - - vvo:131631550 564.688