Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34381g00001 CTTGCTTACTTGCACGAGGCGATTGAGCCAAAAGTTGTACATCGGGATATTAAGTCGAGCAATATTTTAATTGATGATAGCTTTAATGCAAAAATATCTGACTTTGGGCTTGCTAAGTTACTTGGTGCCGGAAAAAGTCACATTACAACTAGAGTAATGGGTACTTTTGGATATGTAGCTCCAGAATATGCGAATTCTGGCTTGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTATTGCTTCTTGAAGCAATTACAGGAAGAGATCCAGTTGATTATAGCCGATCAGCAGCCGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTAGGGTGTAGGCGCTCAGAAGAGGTGGTGGACCCTAATATTGAGACTAGGCCATCAACTAGTGCCCTAAAACGATCCCTTTTAACTGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTTCGCATGCTTGAATCAGAGGAATATCCTATACCTCGAGAGGTTTGGCATTCGATTCTTATATTTTTCATTGTAACATGGCAATCTGTGCTTTATGAAATTACATTTCGTTCTTTACAAAACAAAAGGGTTTGGCTACACATAAGACAAAGGGAATGA 630 0.3968 LAYLHEAIEPKVVHRDIKSSNILIDDSFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGCRRSEEVVDPNIETRPSTSALKRSLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREVWHSILIFFIVTWQSVLYEITFRSLQNKRVWLHIRQRE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34381g00001 209 Pfam Protein kinase domain 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34381g00001 209 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34381g00001 209 PANTHER OS01G0323000 PROTEIN 1 168 - -
Trme34381g00001 209 SUPERFAMILY Protein kinase-like (PK-like) 1 182 IPR011009 -
Trme34381g00001 209 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34381g00001 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 12 24 IPR008271 GO:0004672|GO:0006468
Trme34381g00001 209 FunFam Putative receptor-like serine/threonine-protein kinase 1 175 - -
Trme34381g00001 209 Gene3D Transferase(Phosphotransferase) domain 1 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34381g00001 Trme-Chr34381 174 1027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34381g00001 1 164 Trihelix Transcription Factor Family AT1G70460 52.381 2.33e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Trme34381g00001 Pkinase 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34381g00001 - - gmx:100785337 325.865