Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3437g00001 ATGGAGATTTCAATTTTTGATGCAAAAGATGATGCCTATTGGTGGGTTCTTTGCACCGAAAAATACTTCCAAGCAAAAGGAATTTCAGAAGAGAGGAAGATGATTGACACAGCAAAGGCAATGAGAGGGTTGAATGGCGACCCATTTTACCCATTGAAGATGCAGATGAGGAAGAGGAACTCACGTTGGAATTACAACAATCCATGGAACACAATCATACAAAACTTCACTTTGCAAGTTTATTTCACCAATCTTCATCAGAGCTGCAAAAGCGACAATCAATTGAGGATCTCTCGCAACCACTGCCACCCTCAAAACCACCATCCAAAGGAACCACCAGATTTGTTCATAGCGCCGTCTCCAGTTCCCGCACCGTTAAAACCACCAGGCATCAAACCAACTCTGTTTTCATTCCCGAAATCACGTGATCTGATGGGTTTTACAAGCTCCATATATGCGAAATCCTTTTTCACCTTCGATCCCGGCTTGAAATCTTCTTGTGGTCTCTTGCTCAATCTTTGGCCGCCGTATTCAAACTTGCAATTTACAAAGCTTCGCGGTGACTTTCTCCCCCACTGTGTTGAGTGGCCGCAAGGACCGGCGTCGTGCTGGCCATTGGTGCCACGGAGCTCTGTGGCACGGAGTTTCCATGTGGTTTTCGATGCCGATCACCGTTTTCTGTCTCTGGCGCTGAAATCAAGCGACAAGGTTGTTTTGCTTTCTCTTTTGTGGCTGCCTTGGGACAGAGGGAGAAAGGACTTGGCCTTTGGGGTTGAATTTGGGCTCGTGGAGGAGCCTGTTCCTGTTTACGATGGAGATAGAACTTTGGGATCATACACCAATTGCATTGCAACTCCTTACCTCTTGACAAAATTGGATATAATGTCAATACTTGTTTATGTAGCTGCAAATTTATGTGTATTAAAGCATGATGTTTTTCTATTGTCAAAAGGGGAGATCAATATTCAAATCCTTAACACTTTGATTTTGAAAATTAGATTGCTTGGTCTTTGTTTCTTTAAGGATTTTGGTACCTCCATATTTGATATTCAGCTTGTTCTCCCCTGGCATGAATGGAAATTGATGCAATTGCAAAAGAGAAAAGCCAAGGAATTTCATGATGAGCAAGTATATAATGAAGACAAATTTGATTTTTACTCAAATACTCCCAAGTTTGCTCACCACCACAATCACTTTGAGGGTTTCATGCACTTTAAGTACAAGGAAGAAGAGATCAGTTTTTCCCTTTCAAGGTATGATCTTATTCTTCTAATTGAGGAGCTACTCAAGACTTATGAGACAGTTGCTTACTATGTTGCTGCCAAGTGTGGCTTAATCATAACTGTAAGAGATGGAATGAATCCCATTCCCTACAAATCTCTAGTTAGTCGTATAGGGAATGATACACTGGATAAACTGCTGTTGGGGCTAGCTTCCTTCCTTATGCAAAAAAGCATGTTTTTTGTGTCTGTAGTCCATTGGCCAGTTCCTGTTGTTGGTTTGTTAATTCAAGCTTGTGCTCATTTTGTCTTGGTGAATATTGCTGGACTAATTGCACATTACATTGCTGAATTCAATAACTGGTTGTCACTTATTTTTCAAGAAGCAATATCAGAGCCTACTATATGTATTATAGTCATGGTGACATCCTAG 1653 0.412 MEISIFDAKDDAYWWVLCTEKYFQAKGISEERKMIDTAKAMRGLNGDPFYPLKMQMRKRNSRWNYNNPWNTIIQNFTLQVYFTNLHQSCKSDNQLRISRNHCHPQNHHPKEPPDLFIAPSPVPAPLKPPGIKPTLFSFPKSRDLMGFTSSIYAKSFFTFDPGLKSSCGLLLNLWPPYSNLQFTKLRGDFLPHCVEWPQGPASCWPLVPRSSVARSFHVVFDADHRFLSLALKSSDKVVLLSLLWLPWDRGRKDLAFGVEFGLVEEPVPVYDGDRTLGSYTNCIATPYLLTKLDIMSILVYVAANLCVLKHDVFLLSKGEINIQILNTLILKIRLLGLCFFKDFGTSIFDIQLVLPWHEWKLMQLQKRKAKEFHDEQVYNEDKFDFYSNTPKFAHHHNHFEGFMHFKYKEEEISFSLSRYDLILLIEELLKTYETVAYYVAAKCGLIITVRDGMNPIPYKSLVSRIGNDTLDKLLLGLASFLMQKSMFFVSVVHWPVPVVGLLIQACAHFVLVNIAGLIAHYIAEFNNWLSLIFQEAISEPTICIIVMVTS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3437g00001 550 Gene3D Glycogen Phosphorylase B; 407 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3437g00001 Trme-Chr3437 320 2307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3437g00001 413 490 Trehalose Biosynthesis Gene Families AT1G68020 53.846 1.30e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3437g00001 K16055 - gmx:100812116 83.1889