Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34355g00001 TGGTCATTGATTGCTGGAAGGCTTCCGGGTAGAACAGCTAATGATGTGAAGAACTATTGGAACGCACACTTGCTTAAGAAGGTGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANCCATGAAAGCTCACGAAGTTATTAAACCTCAACCTCGAACTTTTTCAACTAATTGGTTGAAAGAGAAACATAATAATTTTGTGTCACAACCAGTATTGGCTTCAAATAAAGATGATAAAATTCCTACATATCATGATGATCAATCAGAGATTATGGTTCCAAATCATATTGGTATAGATTGTGCTTCTTCATCAAAACCATGTCTAGGTAATGCGCCAATACCGTGTGCAATGTCGATGGACAGTTTATGGAACTTGGAGGAACCTGTAGGTAGTGAGATAATTGGCTCATGCTCTTCAGTTCATGAGGAGAATTATAATAATATGGAGTTTCCAAATGTTGATGATTCTTTTTGGGATTCCAATCTTTATGATTTCGATTCTCTTTGGGATCTTTAG 528 0.3371 WSLIAGRLPGRTANDVKNYWNAHLLKKVXXXXXXXXXXXXXXXXMKAHEVIKPQPRTFSTNWLKEKHNNFVSQPVLASNKDDKIPTYHDDQSEIMVPNHIGIDCASSSKPCLGNAPIPCAMSMDSLWNLEEPVGSEIIGSCSSVHEENYNNMEFPNVDDSFWDSNLYDFDSLWDL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34355g00001 175 Gene3D - 1 49 - -
Trme34355g00001 175 ProSiteProfiles Myb-like domain profile. 1 24 IPR001005 -
Trme34355g00001 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 28 IPR017930 -
Trme34355g00001 175 SUPERFAMILY Homeodomain-like 1 29 IPR009057 -
Trme34355g00001 175 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 64 - -
Trme34355g00001 175 CDD SANT 1 24 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34355g00001 Trme-Chr34355 316 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34355g00001 1 83 MYB Transcription Factor Family AT1G66370 38.462 2.44e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme34355g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34355g00001 - K09422 mtr:11424892 208.764