Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34333g00001 ATTGTGCGCAGAAATTTCCCTCAGGCAACCATCAGTGATATGATAGAAGATGCTTCCCAAGGCATCTCATTTGTGTGCAACAACATTGCAGAATATGGAGGTGACCCTAACAGAATTTATCTAATGGGACAGTCAGCTGGGGCACATATTGCAGCGTGTACAATTGTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGAGTACTTCTTGGAGTCTTTCCCAGATTAAGGCTTATTTTGGTTTATCTGGAGGGTATAATTTGTTCAACCTAGTAGATTACTTCCACAGTAGAGGCCTCTACCGTTCCATCTTTTTAAGATTTGATCTATTACAGTATAATGGAAGGGGAGGAATCACTACGGCGGTTTTCTCCTGA 378 0.4286 IVRRNFPQATISDMIEDASQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLVDYFHSRGLYRSIFLRFDLLQYNGRGGITTAVFS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34333g00001 125 SUPERFAMILY alpha/beta-Hydrolases 6 108 IPR029058 -
Trme34333g00001 125 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 6 91 - -
Trme34333g00001 125 Pfam BD-FAE 7 62 - -
Trme34333g00001 125 Gene3D alpha/beta hydrolase 3 116 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34333g00001 Trme-Chr34333 1 817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34333g00001 4 106 Carbohydrate Esterase AT1G26120 85.437 2.28e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34333g00001 K15889 - gmx:100790850 199.134