Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme342998g00001 ATGGCTCCAGGAGTTGCCATTTTGGCTGCCATGGTTCCTAAAAGTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTATTTGGCATAAAATCTGGTACATCTATGGCTTGCCCTCATGTGACAGGTGCTGCAGCATTCATCAAATCA 156 0.4487 MAPGVAILAAMVPKSDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKS 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme342998g00001 52 Gene3D Peptidase S8/S53 domain 1 52 IPR036852 GO:0004252|GO:0006508
Trme342998g00001 52 Pfam Subtilase family 26 52 IPR000209 GO:0006508|GO:0008236
Trme342998g00001 52 SUPERFAMILY Subtilisin-like 1 52 IPR036852 GO:0004252|GO:0006508
Trme342998g00001 52 ProSitePatterns Serine proteases, subtilase family, serine active site. 35 45 IPR023828 -
Trme342998g00001 52 ProSiteProfiles Serine proteases, subtilase domain profile. 1 52 - -
Trme342998g00001 52 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 52 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme342998g00001 Trme-Chr342998 1 156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme342998g00001 2 52 Subtilisin-like Serine Gene Family AT1G20150 54.902 1.30e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme342998g00001 K25898 - aip:107610251 100.138