Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34285g00001 ATGGCCCCTGAAGTATTAAATAGAAGTTATGGCCCTGAAATTGATATCTGGAGTGCTGGTGTCATTCTTTACATCTTACTTTGTGGTTTCCCTCCGTTTTGGGCAGAAACTGAGCAGGGAGTTGCTGAAGAAATTACACGATCTGTTATTGACTTTAAAAGGAAGCCATGGCCAAAGGTTTCTTATAATGCAAAAGATCTTGTTAAAAAGATGCTTGATCCTGATCCAAAGCTCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGATCGGTAACCTTGTTAAGAAGGAACCTGATATGGAAAAAGACCTTGTTAAGAAGATGCTTACTGCACATGAAGTGTTGGATCATCCATGGTTGCTGAATGCAAAGACAGCTCCTAATGTTTCATTGGGAGAAAAAGTCAGAGAAAAGCTCTTGAAATTTTCTGCTATGAACCGACTTACGAAAACAACATCGAGT 468 0.4017 MAPEVLNRSYGPEIDIWSAGVILYILLCGFPPFWAETEQGVAEEITRSVIDFKRKPWPKVSYNAKDLVKKMLDPDPKLRLTAQEVLDHPWLIGNLVKKEPDMEKDLVKKMLTAHEVLDHPWLLNAKTAPNVSLGEKVREKLLKFSAMNRLTKTTSS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34285g00001 156 FunFam Calcium-dependent protein kinase SK5 1 96 - -
Trme34285g00001 156 PANTHER SERINE/THREONINE-PROTEIN KINASE 104 150 - -
Trme34285g00001 156 SUPERFAMILY Protein kinase-like (PK-like) 1 118 IPR011009 -
Trme34285g00001 156 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34285g00001 156 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Trme34285g00001 156 SMART serkin_6 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme34285g00001 156 Pfam Protein kinase domain 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34285g00001 Trme-Chr34285 241 1074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34285g00001 1 152 EF-hand Containing Proteins AT3G57530 62.500 5.01e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme34285g00001 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34285g00001 K13412 - gmx:100815320 194.126