Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34205g00001 ATGGAATTTGTTATTCAGGGAATTAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTATAGGACTCTATTCCAGTTTTGTTCCACCACTAGTTTATGTTGTTCTTGGAAGTTCAAGGGATCTTGCTGTAGGACCTGTTTCTATTGCCTCTCTTGTTTTGGGATCTATGCTTGCAGAGGAAGTATCTCCTAAAACACAACTTGCTCTTTTTATTCAGTTAGCTTTTACATCAACTTTTTTTGCTGGTATTTTTCAAGCCGCTCTTGGAATTCTAAG 275 0.3745 MEFVIQGISYAKLASLPPIIGLYSSFVPPLVYVVLGSSRDLAVGPVSIASLVLGSMLAEEVSPKTQLALFIQLAFTSTFFAGIFQAALGIL 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34205g00001 91 ProSitePatterns SLC26A transporters signature. 18 39 IPR018045 GO:0008271|GO:0008272
Trme34205g00001 91 PANTHER SULFATE TRANSPORTER 4 91 IPR001902 GO:0016020|GO:0055085
Trme34205g00001 91 Pfam Sulfate permease family 4 91 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34205g00001 Trme-Chr34205 624 990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34205g00001 6 91 Inorganic Solute Cotransporters AT3G15990 77.907 4.76e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34205g00001 K17471 - nnu:104609954 145.976