Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme341g00001 ATGTTCATTGAAGCTGAAGCTGATATAACACTTGATCAATTTGGTGATGCTCTACAACCTCCATTCCCTTGTTTCCAAGAAATTCTACATGATGTTCCTGGCTCAGAAAAAATTATTGATCGTTCCATTCGACTCATACAGGTCACACGTCTCAAATGTGGTGGTTTCATATTGGCCTTGAGTTTAAACCATACATTGGGCGATGCAGCTGGTTTAAGACAATTCATACATGCTTGGACAGAAATGGCTCGAGGCGCAAATCAGCCTTCTATTCAACCTGTGTGGCGCAGAGAGATCCTAATGGCAAGAGACCCGCCACATATTACATGCAACCATCGTGAATACGAACAAATTATACTTCCTCAAAATACCATCAAGGAAGAAGATATAGTCCATCAATCTTTCTTCTTTACACCTGCTCACCTAGTTGCAATTCGTTGCTTGGTACCAGTTCATCTTCGTCAATGCACTACATTCGATCTTATCGCTGCATGCTATTGGTATTGTCGCACAAAAGCATTGCAGTTAAAGCCAGAGGAAGAGGTACGACTGATGTGCGTTGTTAATGCACGTTCGAGGTTTACTGACCGCTCGTCACTTGTTGGATATTATGGTAACTGTATTGCTTTTCCAGCAGCCGTCACTACCGCAGGGAAACTTTGTGGAAACCCACTAGGTTATGCAGTAGAATTGATAAGAAAAGCAAAAGCTCAAGTTACGGAGGAATACATGAATTCTGTGGCAGATCTTATGGTTATCAAGGAACGATGTTCATTTACAGATTTAAGGTCTTGTATTGTGTCAGATTGGACTCGTGCTAAGTTTGCAGAAGTTGATTTTGGTTGGGGCGGACCGGTGTATAGCGGAGCGGCAAAGGGTGGACTTGGATCTTTTTCTGGAGGAACCTTTATTGTTCCACATAAGAATGCAAAAGGAGAAGGTGTGATATTACCAATTTGTCTGTCATCTGAAGATATGAAGAGGTTTGCCAAAGAGTTAGATGAAATGCTTGGTAGCCAAAATGATGCTACAATAAGTGGGTCTAGATTTGTTACATCTACTATATAG 1068 0.4148 MFIEAEADITLDQFGDALQPPFPCFQEILHDVPGSEKIIDRSIRLIQVTRLKCGGFILALSLNHTLGDAAGLRQFIHAWTEMARGANQPSIQPVWRREILMARDPPHITCNHREYEQIILPQNTIKEEDIVHQSFFFTPAHLVAIRCLVPVHLRQCTTFDLIAACYWYCRTKALQLKPEEEVRLMCVVNARSRFTDRSSLVGYYGNCIAFPAAVTTAGKLCGNPLGYAVELIRKAKAQVTEEYMNSVADLMVIKERCSFTDLRSCIVSDWTRAKFAEVDFGWGGPVYSGAAKGGLGSFSGGTFIVPHKNAKGEGVILPICLSSEDMKRFAKELDEMLGSQNDATISGSRFVTSTI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme341g00001 355 Gene3D - 113 333 IPR023213 -
Trme341g00001 355 Pfam Transferase family 2 335 - -
Trme341g00001 355 Gene3D - 1 112 IPR023213 -
Trme341g00001 355 PANTHER ACYL TRANSFERASE 4 2 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme341g00001 Trme-Chr341 413 2000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme341g00001 1 336 Monolignol Biosynthesis Gene Families AT5G48930 28.371 1.90e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme341g00001 K19861 - gmx:100792864 441.81