Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34128g00001 CATGGTGATGAGTACAAAACTCCAGCAGCCCTTGCAAAACCACATAAAGAAACCGGGTCCGAACCAAAGCTTATCAAGAGGTATTCGTGCCCTTACGGTGGCTGCAAACGTAACAAGGATCACAAGAAATTTCAGCCTCTGAAGACTATTTTATGTGTCAAAAACCACTACAAAAGAACACACTGTGACAAGAGTTACACTTGCAGCAGATGCCACACGAAAAAGTTTTCTGTGATCGCAGATCTCAAAACTCATGAAAAACACTGCGGCAAGGATAAGTGGCTCTGTTCATGCGGCACAACATTTTCAAGGAAAGACAAACTTTTTGGACACATTGCTCTATTCCAAGGCCATACCCCGGCTATTCCTTTGGAAGAAAACAAAGGACTTGCCGAGCCACCTGATCGATGCGACGCCAAAGAAAACAGCACTATGGTAGGAAGCATGAACTTCTGTTTTGGATCAAATCCTTCAAGTGAAAATGGAGTTGATAACATCATGGATGTGAAAGGTAATATTGATGATCCTATCAATTACTTCTCATCTTTGAACTTCGAAGGCTGTAACTTTGGTGCGTTTAATGAATTCTCACAACCTCCATTCGAAGATTCAGATAGCTCTTTCTCTTTTCTCATGTCGGGATCATTTAATTATGCTCCTAAGTCGGGTGGCGAATCATGTTCTGACAATCTGTAA 696 0.4181 HGDEYKTPAALAKPHKETGSEPKLIKRYSCPYGGCKRNKDHKKFQPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEENKGLAEPPDRCDAKENSTMVGSMNFCFGSNPSSENGVDNIMDVKGNIDDPINYFSSLNFEGCNFGAFNEFSQPPFEDSDSSFSFLMSGSFNYAPKSGGESCSDNL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34128g00001 231 Gene3D Classic Zinc Finger 53 122 - -
Trme34128g00001 231 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 1 203 IPR044300 GO:0010044|GO:0010447
Trme34128g00001 231 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34128g00001 Trme-Chr34128 1 696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34128g00001 1 229 C2H2 Transcription Factor Family AT1G34370 65.106 9.68e-101 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trme34128g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34128g00001 - - gmx:100801536 421.009