Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34124g00001 ATTCTAAGGGTCCTATTAACAATTTTGGACTCGTCCAATGATCCAAGGACTCTAGCTGTTGCTTGCTTTGACATTTCACAGTTCATCCAGTGCCATCCGGCTGGGCGGATCATTGTGACAGACCTTAAAGCAAAAGAACGTGTGATGAAACTAATGAATCATGAGAGTGCTGAGGTAACTAAAAATGCACTGCTCTGCATCCAACGACTTTTCTTGGGTGCAAAGTATGCGAGCTTCTTGCAGGTCTAG 249 0.4418 ILRVLLTILDSSNDPRTLAVACFDISQFIQCHPAGRIIVTDLKAKERVMKLMNHESAEVTKNALLCIQRLFLGAKYASFLQV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34124g00001 82 Gene3D - 1 74 IPR038497 -
Trme34124g00001 82 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 81 IPR004908 GO:0000221|GO:0046961|GO:1902600
Trme34124g00001 82 Pfam V-ATPase subunit H 2 71 IPR011987 GO:0000221|GO:1902600
Trme34124g00001 82 SUPERFAMILY ARM repeat 1 72 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34124g00001 Trme-Chr34124 187 435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34124g00001 1 81 Primary Pumps ATPases(2) AT3G42050 86.420 8.41e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34124g00001 K02144 - gmx:100788723 152.525