Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34099g00001 ATGGCATTTCAAGATTTCGACCTCATCACAGAACGACGAAAAAGTGAGAAGAGACAACAACTGAAGAAAAGAATCCTCATCGGTGTTGTTTCTACCGTTGTTCTTGCGGGTCTGATAGGTTGTGCGTTCTTCGTTGCCACCTCAAAAGGCGCTTTTGGCGGTAGCAATACAAAGGAAGAATCTTCTCAAACTTCTAAGGGTAACAAACAACAACATATTGCACATTCAGAAAGGATAGTGAAATTGGTATGCACTTCTGCAGATTACAAAGAAAAATGTGAAGGACCTCTTAACAAAGCAATAGAAGCTGATCCTAAACTTCAACACCCTAAAGATCTTCTCAAAGTATATATTAAAGTTGTCGAAGATGAGGTTAACAAAGCTTTCGACAAAACAAACACATTCAAATTTGAAACCGAAGAAGAGAAAGGTGCATTTGAGGATTGTAAAAAGCTATTTGGAGATGCTCAGGATGATTTACAAACCTCTATTGATCAACTTACTGCAATTGAATTCAAGAAACTTTCTTCAAAAGCACCTGACTTGAATAGTTGGTTGAGTGCTGTTATCTCTTTTCAACAGACTTGTATTGATGGTTTTCCTGAAGGGAAAACGAAGACTAATCTTCAGAAACTTTTTGAGGATTCTAAGGAATTTGTTAGCAATTCACTTGCTATGGTCACTCAGGTTTCTACATTCCTTTCTACGGTTCAGACCCTTGCACGCGGCCGTTTGTTGTTGTCCGATAACTCCCCTGTTGCTTCTTTGGATTCTGAAGGTATTCCTGCATGGATCCATGCCGAGGAAAGAAGGGTGTTGAAGGCTGCCGATATTAGACCTACACCTAATGTCACTGTTGCAAAAGATGGTAG 872 0.3956 MAFQDFDLITERRKSEKRQQLKKRILIGVVSTVVLAGLIGCAFFVATSKGAFGGSNTKEESSQTSKGNKQQHIAHSERIVKLVCTSADYKEKCEGPLNKAIEADPKLQHPKDLLKVYIKVVEDEVNKAFDKTNTFKFETEEEKGAFEDCKKLFGDAQDDLQTSIDQLTAIEFKKLSSKAPDLNSWLSAVISFQQTCIDGFPEGKTKTNLQKLFEDSKEFVSNSLAMVTQVSTFLSTVQTLARGRLLLSDNSPVASLDSEGIPAWIHAEERRVLKAADIRPTPNVTVAKDG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34099g00001 290 PANTHER PECTINESTERASE 39 290 - -
Trme34099g00001 290 Pfam Plant invertase/pectin methylesterase inhibitor 80 226 IPR006501 GO:0004857
Trme34099g00001 290 NCBIfam pectinesterase inhibitor domain 75 230 IPR006501 GO:0004857
Trme34099g00001 290 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 230 IPR035513 -
Trme34099g00001 290 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 231 IPR035513 -
Trme34099g00001 290 FunFam Pectinesterase 76 231 - -
Trme34099g00001 290 CDD PMEI-like_3 82 232 - -
Trme34099g00001 290 SMART PMEI_2 75 226 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34099g00001 Trme-Chr34099 1 872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34099g00001 1 290 Carbohydrate Esterase AT4G33230 35.948 1.57e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34099g00001 - - gmx:100784679 357.836