Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34074g00001 GGTCTTACACCAGATAAACATCCTTTTGGTGGCCAAGAGGTAGATGCTTCATCTCTTGGATGGGCGATGTCAGCAGTCTCATCTAGAGCATTCAAGTTGCATGGTAACAAGCAATCAAATGGGATAGACTTCGACATACCCATGATGCTCCCTCTAATTGACATGTGTAATCATAGTTTTAATCCGAATGCTAGAATTGTTCAGGAACAAGAAACTGGTAGCACAAAGATGCGGGTTGTGGCTGAGAAAGCAATCAAGGAAGATGATCCTTTATTGCTTTGCTATGGATGTTTAAGCAATGATCTTTTCCTTCTTGATTATGGATTTGTGATACATTCAAACCCTTATGACTGTATTGAGCTTAAATATGATGGTGCTCTTTTGGATGCTGCAAGCATGGCAGCTGGAGTTTCTTCACCGAACTTCTCCACACCTGCTCCATGGCAGCAACTTATTTTATCTCATCTAAATCTAGCTGGAGAGTCTCCAAATCTCAAG 498 0.4137 GLTPDKHPFGGQEVDASSLGWAMSAVSSRAFKLHGNKQSNGIDFDIPMMLPLIDMCNHSFNPNARIVQEQETGSTKMRVVAEKAIKEDDPLLLCYGCLSNDLFLLDYGFVIHSNPYDCIELKYDGALLDAASMAAGVSSPNFSTPAPWQQLILSHLNLAGESPNLK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34074g00001 166 CDD SET_LSMT 2 110 - -
Trme34074g00001 166 Gene3D set domain protein methyltransferase, domain 1 2 110 - -
Trme34074g00001 166 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 11 161 - -
Trme34074g00001 166 ProSiteProfiles SET domain profile. 1 96 IPR001214 GO:0005515
Trme34074g00001 166 SUPERFAMILY SET domain 7 114 IPR046341 -
Trme34074g00001 166 Pfam SET domain 19 96 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trme34074g00001 SET 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34074g00001 - - gmx:100813630 303.523