Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34051g00001 ATGAGTCATCCAGCTGATGAAAATGTTGAAACAAAAGAGATGGATAGTAGAAGTTTGTCTTCTTCACAAGGTCAGGAACCATACGTGCACAAGGTTGGAGTTCCTCCAAAACAAAACCTCTTTAAGGAATTACGATACACTGTAAAAGAAACATTCTTCTCGGATGATCCTCTACGGCCTTTTAAGGATCAGACGAAGTCCCGGAAGTTCATTCTAGGAATTGAAGCTATATTCCCTATACTTGGTTGGGGAAGAACTTATAACCTCAAAAAGTTTAGAGGAGATCTTATTGCCGGTTTAACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGATACGCAAAGCTTGCAAATTTGTCTCCTCAGTATGGACTGTATTCAAGCTTTGTTCCACCACTGATATATGCGGTCATGGGTAGCTCACGTGACATTGCGATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAATGAAATTGATCCAAATACAAATCCAACAGAATATAGAAGACTCGCTTTTACTGCCACGTTTTTTGCTGGGATTACACAGGCAACTCTTGGAGTTTTTAGGTATGACACATTT 597 0.4054 MSHPADENVETKEMDSRSLSSSQGQEPYVHKVGVPPKQNLFKELRYTVKETFFSDDPLRPFKDQTKSRKFILGIEAIFPILGWGRTYNLKKFRGDLIAGLTIASLCIPQDIGYAKLANLSPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPNTNPTEYRRLAFTATFFAGITQATLGVFRYDTF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34051g00001 199 PANTHER SULFATE TRANSPORTER 38 196 IPR001902 GO:0016020|GO:0055085
Trme34051g00001 199 MobiDBLite consensus disorder prediction 1 29 - -
Trme34051g00001 199 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Trme34051g00001 199 Pfam Sulfate permease family 92 195 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34051g00001 Trme-Chr34051 299 1118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34051g00001 2 195 Inorganic Solute Cotransporters AT1G22150 74.227 4.13e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34051g00001 K17470 - gmx:100777637 340.502