Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme34030g00001 TCACTGTCTCCAGCAGTTCAAACCTTCTGGAAGTGGCTTCAGGATGAAGGTGTTATCACTGCAAAGACACCTGTGAAAGCTAGTGTAGTTCCAGAAGGTCTAGGTTTGGTTGCCCTCAAAGACATTTCTAGGAATGATGTTGTTTTGCAGGTACCAAAAAGGCTATGGATAAATCCAGATGCAGTTGAAGCTTCAGAGATTGGGAAAGTATGCAGTGAGTTGAAGCCATGGTTGTCTGTTATACTCTTTCTCATAAGAGAGAGGTCAAGGAGTGATTCTATTTGGAAGCACTACTTTGGTATTCTGCCACAGGAAACTGATTCTACTATATATTGGTCAGAGGAAGAGCTCCAAGAACTTCAAGGTACTCAACTTCTGAACACAACCCTGTCTGTGAAAGAATATGTGAAGAATGAATGTCTTAAACTGGAAAAAGAAATCATTCTCCCTAATAAGCAGCTTTTTCCTTCTCCTGTAACACTGGATGACTTCTTCTGGGCATTTGGGATGCTCAGATCAAGAGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTATAATTCCACTGGCAGACTTG 576 0.4132 SLSPAVQTFWKWLQDEGVITAKTPVKASVVPEGLGLVALKDISRNDVVLQVPKRLWINPDAVEASEIGKVCSELKPWLSVILFLIRERSRSDSIWKHYFGILPQETDSTIYWSEEELQELQGTQLLNTTLSVKEYVKNECLKLEKEIILPNKQLFPSPVTLDDFFWAFGMLRSRAFSRLRNENLVIIPLADL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme34030g00001 192 SUPERFAMILY SET domain 2 192 IPR046341 -
Trme34030g00001 192 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 2 192 - -
Trme34030g00001 192 Pfam SET domain 33 131 IPR001214 GO:0005515
Trme34030g00001 192 Gene3D set domain protein methyltransferase, domain 1 2 192 - -
Trme34030g00001 192 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme34030g00001 Trme-Chr34030 99 1116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme34030g00001 3 192 NAC Transcription Factor Family AT3G56570 29.648 2.62e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme34030g00001 K00592 - ag:AAA69903 347.821