Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme339862g00001 AACAATGATCATGATTCTAATGGAGTTTTCAGCACAGTTTATTGGCCTGGAGACTTGCAATCTGTTCCTAAGGGATGGACACACAGTAATGAGGAAAGATCATTGAAAATAGGAGTACCTTCCAATGGTGCCTTTACTCAGTTTGTGAATGTAACAAATGACAAGAGTGTGAACGGATCTTCAATCACTGGTTTCTCTATTACTGTCTTTAAAGAAGCTGTCAAACTTTTACCTTATGATTTACATTACAATTTTGTTCCTTTCAATGGCTCATACGACGAAATGGTTCATCAGGTCTACAATAAAGTATGGTAA 315 0.3651 NNDHDSNGVFSTVYWPGDLQSVPKGWTHSNEERSLKIGVPSNGAFTQFVNVTNDKSVNGSSITGFSITVFKEAVKLLPYDLHYNFVPFNGSYDEMVHQVYNKVW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme339862g00001 104 Gene3D - 27 104 - -
Trme339862g00001 104 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 102 IPR015683 -
Trme339862g00001 104 SUPERFAMILY Periplasmic binding protein-like II 10 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme339862g00001 Trme-Chr339862 3 317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme339862g00001 13 100 Ion Channels AT5G27100 47.191 1.56e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme339862g00001 - - mtr:11429954 167.933