Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme339569g00001 ATGCAACTGAAATCGAAAGTCAATGCAGAGATTGATAGTAGTACCAATAAAATATCTTCTCTACAAGCGCTTTTATCTCACCTTTGGTGTTCTGTGATCCGTTCCAAAAAAATTGACCCAGAAGAAGAAGTCCATCTTATGTTCATGATAGGAGTTAGACCAAGATTTGTTCCACCATTGCTAGAAGATTATTTTGGAAATGCAATTGTAGGTTGTGGGATTAAAATGAAAGTTGGGGAGTTGTTGAAGGAAGGTGGACAAT 262 0.3702 MQLKSKVNAEIDSSTNKISSLQALLSHLWCSVIRSKKIDPEEEVHLMFMIGVRPRFVPPLLEDYFGNAIVGCGIKMKVGELLKEGGQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme339569g00001 87 Gene3D - 1 87 IPR023213 -
Trme339569g00001 87 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 85 - -
Trme339569g00001 87 Pfam Transferase family 9 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme339569g00001 Trme-Chr339569 10 271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme339569g00001 6 84 Monolignol Biosynthesis Gene Families AT5G48930 30.380 4.75e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme339569g00001 - - vvo:131606449 118.627