Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33953g00001 ATGTCTCGAATCGAAAGAGGTAAGAAGAGGGAGGAGCACGACAGCGCTTCCGATAACGACATTGAAGCTCACACGCCTCCCAAGAAATCTCTCAAGAAGGATTCCGACAATAACTCTGATGACGATAATCGCATCTTCATCTTTGAGCTTTCGGAAAGCAAGAAGGTTTCCGTCAAGGTTTGGGAGAAAAATATTAGGGTCGACATTCGTCAATTTTATACTAATGAAGATGGCAAGCAAAGTCCTAAGGTGTCGTACTGA 261 0.4368 MSRIERGKKREEHDSASDNDIEAHTPPKKSLKKDSDNNSDDDNRIFIFELSESKKVSVKVWEKNIRVDIRQFYTNEDGKQSPKVSY 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33953g00001 86 SUPERFAMILY ssDNA-binding transcriptional regulator domain 47 83 IPR009044 GO:0003677|GO:0006355
Trme33953g00001 86 MobiDBLite consensus disorder prediction 1 42 - -
Trme33953g00001 86 Gene3D Transcriptional Coactivator Pc4; Chain A 36 84 IPR009044 GO:0003677|GO:0006355
Trme33953g00001 86 Pfam Transcriptional Coactivator p15 (PC4) 48 82 IPR003173 GO:0003677|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Trme33953g00001 PC4 3e-07 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33953g00001 K25815 - msin:131242667 51.9878