Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme339451g00001 TACAAGGTTGGCAAGACTGACCAAGAGTCACATACAGCCATCACTGAATTTGACAGGACTGAGAAGGATATTACGCCTATGGGTGGATTTCCTCATTATGGTATTGTGAAGCACGATTATCTTATGATCAAGGGATGCTGTGTTGGACCGAAGAAGCGGGTTGTCACTCTTCGTCAGTCA 180 0.45 YKVGKTDQESHTAITEFDRTEKDITPMGGFPHYGIVKHDYLMIKGCCVGPKKRVVTLRQS 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme339451g00001 60 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 60 IPR045077 GO:0003735|GO:0005840|GO:0006412
Trme339451g00001 60 SUPERFAMILY Translation proteins 17 60 IPR009000 -
Trme339451g00001 60 Gene3D Translation factors 1 60 - -
Trme339451g00001 60 Pfam Ribosomal protein L3 1 60 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme339451g00001 Trme-Chr339451 3 328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme339451g00001 1 60 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 85.000 2.79e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme339451g00001 K02925 - egr:104450838 124.405