Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33929g00001 ATGTGGGGTTACAAGCGTTTTTTTAGGAGGACGTTGTTGGAAACATCGGAGTATTTGAAGGATGATTGTCTTGTTATGCATTGTACGGTTGGTGTTGTTAAGACGCGTTTTGAAGGATCCAAACAGGGTGTTATTGTGCCTGCTCCTGATATGGGTAGAGATTTCAAGAGTTTGTTTGAATCTCAAGTTGGTTGTGACATTGTTTTTAATGTCAAGGGTGAAAGTTTCAAGGCTCATAAGTTGATTCTTGCTGCTCGGTCGCCTGTGTTTAGAGCTCAGTTTTTTGGACTTGTTGGGGATCCTTCTTGTTTGGAGGAAGTAGTTGTAGAGGATATTGAGCCCTTTATCTTCAAG 354 0.4124 MWGYKRFFRRTLLETSEYLKDDCLVMHCTVGVVKTRFEGSKQGVIVPAPDMGRDFKSLFESQVGCDIVFNVKGESFKAHKLILAARSPVFRAQFFGLVGDPSCLEEVVVEDIEPFIFK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33929g00001 118 ProSiteProfiles MATH/TRAF domain profile. 1 30 IPR002083 GO:0005515
Trme33929g00001 118 SUPERFAMILY TRAF domain-like 2 32 - -
Trme33929g00001 118 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 3 118 IPR045005 GO:0016567
Trme33929g00001 118 Pfam BTB/POZ domain 55 117 IPR000210 GO:0005515
Trme33929g00001 118 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 33 IPR008974 GO:0005515
Trme33929g00001 118 SUPERFAMILY POZ domain 47 117 IPR011333 -
Trme33929g00001 118 Gene3D Potassium Channel Kv1.1; Chain A 34 118 IPR011333 -
Trme33929g00001 118 ProSiteProfiles BTB domain profile. 65 118 IPR000210 GO:0005515
Trme33929g00001 118 CDD MATH 1 30 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33929g00001 Trme-Chr33929 588 1041 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme33929g00001 BTB 7.1e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33929g00001 K10523 - gmx:100786636 214.542