Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33855g00001 TCTAAGCCTGCGCTGGAAACATCTGGAAAGACGATTATCCCACATGGAGAAGGCACGTCAAGAGCCAGAGTTGCTTCACAATTAGACTCCGCCAGCATTCAAAGAGCCAGAGTTGCTTCACAATCAGACTCCACCAGCAATTCATCTGGTAACCGTCATCTAACTGCTGCTGAGAATCAAAGACAGAGGCTTCAGAGGATGATGGATGAGCTTAACGAGGAAGGAGATGGCCGAGCACCCATTGTGAAGCTTGGTGATGCCTCGATGGCATCCCCATTCACTGCTAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGACAAGGTCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTTGGCCTCAACTGCCTTTCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTACAAGCCACAATAAGTGGTGTATTCACTGCTGCATTTTTCCTCTTTATCTCACATGCACGCCCTCTTCCCACTCTCTCAGCTGAACGTCCCCACCCCAACATCTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAATTTACTGTTCACCTGTTTTTTCTGATATCATCTGTCAAAGCAGCTGAAAAATACATGCCAGAGGAATGTATTGAACCAGATGCAGGTTTTCATCCCAACCTGGTTAATACCGTTTCCTACATGGTGAGCATGATGATCCAGGTGGCCACATTTGCCGTAAACTATATGGGCCATCCCTTCAACCAAAGTATTTCTGAAAACAGGCCATTCATGTACGCCCTCGTTGCTGCTGTTGGTTTCTTTACTGTGATAACATCCGATATCTTCAGGGATTTGAATGACTGGTTGAAGTTGGTGCCGTTGCCAGTGGGTTTGAGGAATAATCTCTTGATTTGGGCTTTTCAAATGTTTTTTGTATGCTACTCATGGGAGAGACTGTTGAGGTGGGCCTTTCCCGGTAAAGTCCCAGCTTGGAAGAGGCGACAACAGGTTGCTGTATCTACTTTAGAAAAGAAGAAAGAGCTCTAA 1050 0.459 SKPALETSGKTIIPHGEGTSRARVASQLDSASIQRARVASQSDSTSNSSGNRHLTAAENQRQRLQRMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLSTAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFTVHLFFLISSVKAAEKYMPEECIEPDAGFHPNLVNTVSYMVSMMIQVATFAVNYMGHPFNQSISENRPFMYALVAAVGFFTVITSDIFRDLNDWLKLVPLPVGLRNNLLIWAFQMFFVCYSWERLLRWAFPGKVPAWKRRQQVAVSTLEKKKEL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33855g00001 349 MobiDBLite consensus disorder prediction 23 54 - -
Trme33855g00001 349 PANTHER CATION-TRANSPORTING ATPASE-RELATED 86 325 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Trme33855g00001 349 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 326 IPR023298 -
Trme33855g00001 349 MobiDBLite consensus disorder prediction 1 54 - -
Trme33855g00001 349 Coils Coil 54 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33855g00001 5 349 Primary Pumps ATPases AT5G23630 72.911 2.10e-178 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33855g00001 K14950 - gmx:100789385 577.015