Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33822g00001 ATGTACCTTCTACTTCTCCTGGCTTGCTATGGTGTTTTGAGATTTGTCATGGAAAGTGGKGCAAAAGGTTGTGAGGTTATTGTGAGTGGAAAATTAAGAGCCCAAAGAGCCAAATCCATGAAATTCAAGGATGGTTACATGATTTCTTCTGGACAACCAGTCAAGGAC 168 0.4107 MYLLLLLACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKD 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33822g00001 56 Gene3D - 5 56 IPR036419 -
Trme33822g00001 56 Pfam Ribosomal protein S3, C-terminal domain 8 53 IPR001351 GO:0003735|GO:0006412
Trme33822g00001 56 SUPERFAMILY Ribosomal protein S3 C-terminal domain 5 54 IPR036419 -
Trme33822g00001 56 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 8 53 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33822g00001 8 56 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 91.837 7.40e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33822g00001 K02985 - vvi:100259512 101.293