Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33810g00001 ATGAATATGAATATTCTGATGCAAGCTGTTGCCCGACTGGAGAGAGCTTTTATGGAGTCTGCTGGAAGAAATATTTTTGTTAGTTCAGGTTGTTTGATTTGTTTCATTCGGAGAGGGACGTTATATGCCGCCAACGTTGGAGACTCGCGCGCTGTACTCGGTTCTCTGAAGGGCGTTGGTAAACTTCAAAGATTGGTTGTTAAACAGATGGTTAGAGATCACAATTTACGTGATGGAGGAGATATTCAAGAACAACTCAGGCGCTTGCAGCCAGATACTTATGATAATTTGCATACCTGTTTATTCCTTAGAGACAAAGGTTTAATCGAGACAACTAGATGTATAGGATATGCATATTTGAAGAAGGAGATCAATGATGAAAGTGAAATCCCAATTTGGGAAAGAGTGCCTCTACGTTTTACAAGACCTTTGCTAACATCACAACCAGATGTTTATTCAAGAATCTTAAGCAACTCTGATAAATTCATTATATTTGGATCTAGTGGATTTTGGAAAGGGATATCAAATAAGGATGCTGCTAAAGTTGTTAACACCAGTCCACGAGATGGAATCGCAGAAAGACTTGCCACACTTGCTTTACAGAATGGGGCTAAAAGAAGGGGCAGAACATATAGTCAACTTATAGGGTTGCCTAAGAGTAATCAAATTAGTGGGTCGGACATACGCCTTCACAAATATGATCAATTTAGATCGGCCTATCATGATGATATAACTGTAGTTGTATATTTGGACAACAACAGGTCAAATAGGGCGGGTGTGATGCTAGAGATGAACTCCTATAGYGGCTGCGATGACGGATTTCAACAATCAGAGTTTACAAATTTCTATAATAATGCTAATGCGTGA 867 0.3922 MNMNILMQAVARLERAFMESAGRNIFVSSGCLICFIRRGTLYAANVGDSRAVLGSLKGVGKLQRLVVKQMVRDHNLRDGGDIQEQLRRLQPDTYDNLHTCLFLRDKGLIETTRCIGYAYLKKEINDESEIPIWERVPLRFTRPLLTSQPDVYSRILSNSDKFIIFGSSGFWKGISNKDAAKVVNTSPRDGIAERLATLALQNGAKRRGRTYSQLIGLPKSNQISGSDIRLHKYDQFRSAYHDDITVVVYLDNNRSNRAGVMLEMNSYSGCDDGFQQSEFTNFYNNANA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33810g00001 288 SUPERFAMILY PP2C-like 4 248 IPR036457 -
Trme33810g00001 288 ProSiteProfiles PPM-type phosphatase domain profile. 1 251 IPR001932 -
Trme33810g00001 288 Pfam Protein phosphatase 2C 32 205 IPR001932 -
Trme33810g00001 288 CDD PP2Cc 4 248 IPR001932 -
Trme33810g00001 288 PANTHER PROTEIN PHOSPHATASE 14 249 IPR015655 GO:0004722|GO:0006470
Trme33810g00001 288 SMART PP2C_4 4 249 IPR001932 -
Trme33810g00001 288 Gene3D - 3 257 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33810g00001 Trme-Chr33810 72 938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33810g00001 27 253 PP2C-type Phosphatase Gene Family AT5G06750 38.034 1.11e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33810g00001 K01102 - psat:127131157 211.46