Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33778g00001 ATGTTGTATAATGGTTATATAATCATTCTGGCACTTACTCTTGGATTCACATTTTGTAGGAATGAAAGTGAGGATATCAGGAAAGTAGTAGACAATGTTACTAAGTTACTAGACAGAACAGACTTATTCATTGCAGACCATCCAGTGGGAGTTGAATCTCGTGTACAAGATATTATTCAACTGCTGAACAGCCAACAATCAAAAGATTCTATACTGATTGGGATATGGGGCATGGGAGGGATTGGCAAAACAACCATTGCTAAAGCCGCTTATAACAAAATTCGTCACGATTATGAGACAAAGTGCTTCCTCCTAAATGTTAGGGAAGTTTGGGAACAAGATAACGGCGAAGTTTCTCTACAACAACGACTTCTTTCTGACATCTACAAAACAACTAAAATAAAGATAGGTACAGTTGAATCGGGAAAAATGATATTGCAGGAAAGACTTAGCCAGAAAAGGATATTTCTTGTGTTGGACGATGTGAATAAACTGGACCAATTGAATGCTTTGTGCGGAAGTCGCGAATGGTTTGGTCAAGGAAGTATAATAATTATCACAACGAGAGATGGTGATGTACTTCGTAGGCTTGAAGTTGACTAT 603 0.3781 MLYNGYIIILALTLGFTFCRNESEDIRKVVDNVTKLLDRTDLFIADHPVGVESRVQDIIQLLNSQQSKDSILIGIWGMGGIGKTTIAKAAYNKIRHDYETKCFLLNVREVWEQDNGEVSLQQRLLSDIYKTTKIKIGTVESGKMILQERLSQKRIFLVLDDVNKLDQLNALCGSREWFGQGSIIIITTRDGDVLRRLEVDY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33778g00001 201 Gene3D - 21 200 IPR027417 -
Trme33778g00001 201 Pfam NB-ARC domain 52 195 IPR002182 GO:0043531
Trme33778g00001 201 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 195 IPR044974 GO:0006952
Trme33778g00001 201 PRINTS Disease resistance protein signature 72 87 - -
Trme33778g00001 201 PRINTS Disease resistance protein signature 149 163 - -
Trme33778g00001 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33778g00001 Trme-Chr33778 1 603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33778g00001 49 200 WRKY Transcription Factor Family AT5G45050 33.553 1.04e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33778g00001 - - tpra:123891787 306.219