Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3373g00001 ATGGATTTTCGAAAGGTATATACTGATATAGTTGGCAGTGCATATTACGTCGCACCAGAAGTTCTACGTCAGAAATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATTTTGTATATCTTACTCTGTGGTGTGCCTCCATTTTGGGCAGAGACAGAAAAGGGAATATTCGATGCCATATTGCAAGGTCATATTGACTTTGATAGTCATCCATGGCCAATCATATCAAACAGTGCTAAGGACCTTGTTCGTAAGATGCTTACACAAGATCCAAACAAACGCATTACTGCTTCTCAGAGCATCCATGGCTTAAAGAATGTGGAAATTCCAACAACTGACAAGCCAGTAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGCGCAACAAATAAACTAAACAAACTCAGCCTCAAGGCTAATGTAGAGGGAAATGGAACAATTGACTACATAGAATTCATAACTGCTACGATGCATAGACATAG 488 0.3975 MDFRKVYTDIVGSAYYVAPEVLRQKYGKEIDIWSAGVILYILLCGVPPFWAETEKGIFDAILQGHIDFDSHPWPIISNSAKDLVRKMLTQDPNKRITASQSIHGLKNVEIPTTDKPVDSAVLSRMKQFSATNKLNKLSLKANVEGNGTIDYIEFITATMHRH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3373g00001 162 Gene3D Transferase(Phosphotransferase) domain 1 2 149 - -
Trme3373g00001 162 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3373g00001 162 Pfam Protein kinase domain 7 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3373g00001 162 SUPERFAMILY Protein kinase-like (PK-like) 5 112 IPR011009 -
Trme3373g00001 162 SMART serkin_6 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme3373g00001 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3373g00001 Trme-Chr3373 657 2243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3373g00001 5 162 EF-hand Containing Proteins AT1G50700 55.814 7.71e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme3373g00001 Pkinase 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3373g00001 K13412 - jre:108993729 216.468