Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33711g00001 GTCCTGGTAACTGGATATTTTCACAATGATTATCAACACCTTGCAAAGTCCAATCTAGTGTGCGTCTGCGGCGAAGCAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGCTATCACCGCATTCTCCTGGATTCGTAAATCTTTATTTGAGCTTCGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTTTGCACGATCCTGCTGCTTCAATGGAAGAGTCATACAACTGGATTGAGTTTCGACTTCAGATGAGGCTTTCTAATTTGCTTTTTACAACACCAAAGACCATTGATGTTTTCTCTAGTAAAGTATCACCTACTGCACTGAAAGAGACTAAAAA 374 0.4037 VLVTGYFHNDYQHLAKSNLVCVCGEASVPVEIVQVGVYRCWLSPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEESYNWIEFRLQMRLSNLLFTTPKTIDVFSSKVSPTALKETK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33711g00001 124 SUPERFAMILY E set domains 1 71 IPR014756 -
Trme33711g00001 124 Gene3D Immunoglobulins 1 74 IPR013783 -
Trme33711g00001 124 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33711g00001 Trme-Chr33711 43 416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33711g00001 1 124 CAMTA Transcription Factor Family AT3G16940 54.400 3.93e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33711g00001 K21596 - gmx:100776839 214.157