Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33710g00001 TATGGGATCAATCTGGCTCAAGGTATTCTGGAGCTTCACTCTAAAGGGATCCTCGTTCTCAACCTTAAACCATGTAATGTTCTTCTCGACGACAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCCAATCTTTTGCTTGGCTCCTCATTTGTTAGCTCAGATATTGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAACAATGGAAACCAGAGGTCAGAGGCCCTATATCATTTGAATCGGATTCATGGGGATTTGGGTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATGCTCTGTTGGTGGAATATACGGATCAGTTGTTGAAAAGCATGAAAAGCCACATATCCCAAGTGGCCTTCCTTCTCCCATTGAGAATATCCTTAGTGGATGTTTTGAGTATGATTTGAGGAATCGCCCTCTGATGGTAGATATTCTGCGGGTCTTTAAAAGCTCACTGAAGGAACTGGCCAGTGACGGAGGATGGAGATATCAAGGAATTCTGAAAGTAATCCCAAAATCAGGCAGCACTGACTACACTGAATGGTTCCTCTCAAAGGATCATCTTCAGGTTGGCGACATGGTCCGATCCAGAAAACCTCCCAACTCATGCAAAGCTCAAAACATGATTGTCCCAGAAGGAACTGTTGTCGGCCTAGAACGTACTGCAGATAACGGATTCGTTCTTGTGAGGGTGCACGGTATTCACGACCCT 735 0.4463 YGINLAQGILELHSKGILVLNLKPCNVLLDDNDQAILGDVGIPNLLLGSSFVSSDIAQRLGTPNYMAPEQWKPEVRGPISFESDSWGFGCTIVEMLTGNQPWYGCSVGGIYGSVVEKHEKPHIPSGLPSPIENILSGCFEYDLRNRPLMVDILRVFKSSLKELASDGGWRYQGILKVIPKSGSTDYTEWFLSKDHLQVGDMVRSRKPPNSCKAQNMIVPEGTVVGLERTADNGFVLVRVHGIHDP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33710g00001 245 Pfam Protein kinase domain 4 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme33710g00001 245 PANTHER OS06G0639500 PROTEIN 1 245 - -
Trme33710g00001 245 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme33710g00001 245 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme33710g00001 245 Gene3D Transferase(Phosphotransferase) domain 1 1 172 - -
Trme33710g00001 245 SUPERFAMILY Protein kinase-like (PK-like) 3 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33710g00001 Trme-Chr33710 1 1042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33710g00001 1 154 MAP Kinase Kinase Kinase AT4G26890 30.128 3.37e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Trme33710g00001 Pkinase 8.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33710g00001 - - gmx:100789098 426.402