Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33688g00001 ATGTTAGGATCACAATGGAGTAAGGCGGAGCTTGAACGTTTCTATGAAGCTTACCGTGAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGGACCATGGAAATGGTAGAAGCCCTGTACACTATGAACAAG 144 0.4306 MLGSQWSKAELERFYEAYREYGKDWKKVALAVRNRTMEMVEALYTMNK 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33688g00001 48 SUPERFAMILY Homeodomain-like 3 47 IPR009057 -
Trme33688g00001 48 Pfam Myb-like DNA-binding domain 4 40 IPR001005 -
Trme33688g00001 48 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Trme33688g00001 48 Gene3D - 6 48 - -
Trme33688g00001 48 ProSiteProfiles SANT domain profile. 1 48 IPR017884 -
Trme33688g00001 48 CDD SANT 6 48 IPR001005 -
Trme33688g00001 48 PANTHER LIN-9 1 48 IPR010561 GO:0006351|GO:0017053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme33688g00001 Myb_DNA-binding 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33688g00001 - - dzi:111277302 92.0485