Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme336666g00001 ATGAAGTTTTCCGTCTCCCCTGTTGTGCGTGTGGCTGTTCAGTGCAAGGTTGCTTCTGATCTTCCTAAGCTAGTTGAAGGTCTCAAACGTTTGGCCAAGTCAGATCCTATGGTTGTTTGTTCTATTGAGGAGTCCGGAGAACACATTATTGCTGGTGCAGGAGAGCTTCATCTAGAGATCTGTTTGAAGGACTTGCAGGATGATTTCATGGGTGGAGCTGAGATTATTAAATCCGACCCTGTTGTGTCATTCAGGGAGACTGTTCTAGATAGATCAATCCGCACAGTGATGAGTAAATCACCCAACAAGCA 311 0.4534 MKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSIRTVMSKSPNK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme336666g00001 103 CDD EF2_snRNP_III 7 79 - -
Trme336666g00001 103 Pfam Elongation Factor G, domain III 7 69 IPR041095 -
Trme336666g00001 103 Gene3D Elongation Factor G (Translational Gtpase), domain 3 6 83 - -
Trme336666g00001 103 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 103 - -
Trme336666g00001 103 FunFam Translation elongation factor 2 6 83 - -
Trme336666g00001 103 SUPERFAMILY EF-G C-terminal domain-like 4 80 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme336666g00001 Trme-Chr336666 19 329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme336666g00001 1 103 Eukaryotic Initiation Factors Gene Family AT1G56070 95.146 6.06e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme336666g00001 K03234 - bvg:104906141 202.216