Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme33652g00001 ATGTATCTGCTCATGGTTCTGGTTTATTTGCAGGACTTGGATGACATGAACATCGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGATTTTTACAGATTTTGTCAGAAACTTGGTGGTGCTACTGCTGAGATAATGTCTGACCTTCTTGCTTTTGAGGCTGATAGAAGGGCTGTCAATATTACCATAAACAGTATTGGTACTGAGCTTACCCGAGATGACCGTAGGAAATTGTACTCTAACTTCGGTTGTTACATTGGTGGATGTACGTGTTTTCCCTCTTTCAATTTGTATGCTTCTTGGTCGCTTCTTGTTTGTGTTTCTCAGGGTGGTAGATTTGTTTTTATTAGTAGCCAAGTCCGTGCTGTTATGGAGAAATACCCTCCTTATCAATCTATTTTTGCCAAGCTATCATATGGAGAGAGCCAGATGCTTGACAAGGCATTCTATGAGGAAGAGGTCAAGAGGCATTGCTTAGCATTTGAGCAACAG 498 0.4056 MYLLMVLVYLQDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGCYIGGCTCFPSFNLYASWSLLVCVSQGGRFVFISSQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRHCLAFEQQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme33652g00001 166 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 10 166 IPR016727 GO:0033179|GO:0046961|GO:1902600
Trme33652g00001 166 SUPERFAMILY V-type ATP synthase subunit C 10 165 IPR036079 -
Trme33652g00001 166 Pfam ATP synthase (C/AC39) subunit 9 88 IPR002843 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme33652g00001 Trme-Chr33652 11 1063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme33652g00001 11 166 Primary Pumps ATPases(2) AT3G28710 73.718 1.42e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme33652g00001 K02146 - gmx:100780773 228.794