Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme3361g00001 TTCTGTTCCACAAAGTTCAATACTTTGTTTTCTGAAGGTGGATATGGCCTTGCATATTCTGCCACATTTCCCCTTGTAGCTCTAAAGACCCAATTGCAAAATGAATCCGCTGAAAAAAGATTTTCATCAGTTTTGAAAGATCTTTCAGATGGTAATGGATTAAAATCCCTTTACAAAGGCTATGGGACAACTGTGCTTACCAAAATACCAGCAACATTGCTTTATTGTGGAATGGTTGACAGCACACAGAAAGAATGCAAAACTGACGTTGCTAAGAGAGGTGGATCTTTCATGGCTGCACTCGTCTCTCAATCAATCTCAATTCCAGGGGATGTGGTCAGCAAGACCCTAATGGTCCAAAACAAACACACCACTCCTTATAAAGGTGCACTGCATTTGGTTGAAGAAATACTAAAAAAAGACGGCATAAAAGGGTTATATAGAGGATATAACATCCCTCCAGTCGCATCTAGTTTCATATGGTGGAAAGCTTATGAGGCAACTCAAAGTGCTTTTATTAAATTCAACCAAAAAGAAGACGTTACATGGAAACACAGACTTCTCTACCAAGCAACATCAGGATTTGCTGCAAGCGTCCTAACAAGTAGTTACGCGCATCCCTTGGATACCATAACGACCCTACAACAGGTAAATCATAACAGTACAGAGACAGCAAGGAAAATTGCGATGGAATTGTTTAAGGAAAATGGATTGAAAGCCTTTTATAGGGGCTATCTACCGGCTGTTGTTAACCTAGGCATATGTGGCGCTGCTTACGCTGTTGTGCATAGCTCCCTCAAGCCAGATGTAGGGGGCTATCTACCGGCTGTTGTTAACCTAGCCATATGTGGCGCTGCTTACGCTGTTGTGCATAGCTCCCTCAAGCCAGATGTAGGGTGTTAA 903 0.4208 FCSTKFNTLFSEGGYGLAYSATFPLVALKTQLQNESAEKRFSSVLKDLSDGNGLKSLYKGYGTTVLTKIPATLLYCGMVDSTQKECKTDVAKRGGSFMAALVSQSISIPGDVVSKTLMVQNKHTTPYKGALHLVEEILKKDGIKGLYRGYNIPPVASSFIWWKAYEATQSAFIKFNQKEDVTWKHRLLYQATSGFAASVLTSSYAHPLDTITTLQQVNHNSTETARKIAMELFKENGLKAFYRGYLPAVVNLGICGAAYAVVHSSLKPDVGGYLPAVVNLAICGAAYAVVHSSLKPDVGC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme3361g00001 300 Pfam Mitochondrial carrier protein 18 84 IPR018108 -
Trme3361g00001 300 Pfam Mitochondrial carrier protein 97 174 IPR018108 -
Trme3361g00001 300 Pfam Mitochondrial carrier protein 187 267 IPR018108 -
Trme3361g00001 300 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 20 267 - -
Trme3361g00001 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 85 IPR018108 -
Trme3361g00001 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 185 269 IPR018108 -
Trme3361g00001 300 Gene3D Mitochondrial carrier domain 13 270 IPR023395 -
Trme3361g00001 300 SUPERFAMILY Mitochondrial carrier 14 259 IPR023395 -
Trme3361g00001 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 175 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme3361g00001 Trme-Chr3361 759 2414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme3361g00001 21 267 Chloroplast and Mitochondria Gene Families AT5G15640 30.686 3.67e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme3361g00001 K15121 - apan:127257790 139.813