Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme336041g00001 ATGGCATCATCTAAAGTCAACAAGAAAGTGTTTGATTCAGAAGAAGCTTTAGCAACGGTTAAGGATCTAAGAACAACGTTTGACTCTGGTAAGACTCGAAACTACGAATGGAGAGTTTCTCAATTGAAAGCACTTTTGGAGTTAACTGAACAGAAGGAGCAAGAGATTGTTAAAGCTCTCTACTCTGACTTATCCAAATCTGAAGCTGAATCATTCATCCAAGAG 225 0.3822 MASSKVNKKVFDSEEALATVKDLRTTFDSGKTRNYEWRVSQLKALLELTEQKEQEIVKALYSDLSKSEAESFIQE 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme336041g00001 75 SUPERFAMILY ALDH-like 14 72 IPR016161 GO:0016491
Trme336041g00001 75 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 75 IPR016162 GO:0016491
Trme336041g00001 75 PANTHER ALDEHYDE DEHYDROGENASE 15 75 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme336041g00001 Trme-Chr336041 22 246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme336041g00001 11 75 Aldehyde Dehydrogenase Gene Family AT4G34240 47.692 7.38e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme336041g00001 K00128 - pvu:PHAVU_001G0727000 94.7449